PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.ZR8E2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 61aa    MW: 7331.49 Da    PI: 10.6552
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.ZR8E2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.38.3e-091238229
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIar 29
                     + W++eE e +++a +++G++ Wk++  
      Aradu.ZR8E2 12 LQWSKEELEHFYKAYRKYGKD-WKKVLD 38
                     57*****************99.***975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF002492.0E-61338IPR001005SANT/Myb domain
SuperFamilySSF466891.01E-61337IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-51348IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 61 aa     Download sequence    Send to blast
MQKRRLADML GLQWSKEELE HFYKAYRKYG KDWKKVLDQE SEILSPKKLG SRSSRTSNKK  60
V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015938766.13e-15PREDICTED: LOW QUALITY PROTEIN: protein ALWAYS EARLY 3-like
RefseqXP_016197191.13e-15PREDICTED: protein ALWAYS EARLY 3
SwissprotQ6A3323e-13ALY3_ARATH; Protein ALWAYS EARLY 3
TrEMBLK7MJL16e-15K7MJL1_SOYBN; Uncharacterized protein
STRINGGLYMA17G02741.12e-14(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2106422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21430.22e-14DNA binding